Characterization of SP1, a stress-responsive, boiling-soluble, homo-oligomeric protein from aspen.
Identifieur interne : 004619 ( Main/Exploration ); précédent : 004618; suivant : 004620Characterization of SP1, a stress-responsive, boiling-soluble, homo-oligomeric protein from aspen.
Auteurs : Wang-Xia Wang [Israël] ; Dan Pelah ; Tal Alergand ; Oded Shoseyov ; Arie AltmanSource :
- Plant physiology [ 0032-0889 ] ; 2002.
Descripteurs français
- KwdFr :
- ADN complémentaire (composition chimique), ADN complémentaire (génétique), Acide abscissique (pharmacologie), Adaptation physiologique (génétique), Adaptation physiologique (physiologie), Alignement de séquences (MeSH), Analyse de séquence d'ADN (MeSH), Cartographie peptidique (MeSH), Chlorure de sodium (pharmacologie), Clonage moléculaire (MeSH), Cycloheximide (pharmacologie), Données de séquences moléculaires (MeSH), Eau (pharmacologie), Eau (physiologie), Mannitol (pharmacologie), Populus (effets des médicaments et des substances chimiques), Populus (génétique), Populus (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Séquence d'acides aminés (MeSH), Séquence nucléotidique (MeSH), Technique de Northern (MeSH), Électrophorèse bidimensionnelle sur gel (MeSH).
- MESH :
- composition chimique : ADN complémentaire.
- effets des médicaments et des substances chimiques : Populus.
- génétique : ADN complémentaire, Adaptation physiologique, Populus, Protéines végétales.
- métabolisme : Populus, Protéines végétales.
- pharmacologie : Acide abscissique, Chlorure de sodium, Cycloheximide, Eau, Mannitol.
- physiologie : Adaptation physiologique, Eau.
- Alignement de séquences, Analyse de séquence d'ADN, Cartographie peptidique, Clonage moléculaire, Données de séquences moléculaires, Séquence d'acides aminés, Séquence nucléotidique, Technique de Northern, Électrophorèse bidimensionnelle sur gel.
English descriptors
- KwdEn :
- Abscisic Acid (pharmacology), Adaptation, Physiological (genetics), Adaptation, Physiological (physiology), Amino Acid Sequence (MeSH), Base Sequence (MeSH), Blotting, Northern (MeSH), Cloning, Molecular (MeSH), Cycloheximide (pharmacology), DNA, Complementary (chemistry), DNA, Complementary (genetics), Electrophoresis, Gel, Two-Dimensional (MeSH), Mannitol (pharmacology), Molecular Sequence Data (MeSH), Peptide Mapping (MeSH), Plant Proteins (genetics), Plant Proteins (metabolism), Populus (drug effects), Populus (genetics), Populus (metabolism), Sequence Alignment (MeSH), Sequence Analysis, DNA (MeSH), Sodium Chloride (pharmacology), Water (pharmacology), Water (physiology).
- MESH :
- chemical , chemistry : DNA, Complementary.
- chemical , genetics : DNA, Complementary, Plant Proteins.
- chemical , metabolism : Plant Proteins.
- chemical , pharmacology : Abscisic Acid, Cycloheximide, Mannitol, Sodium Chloride, Water.
- drug effects : Populus.
- genetics : Adaptation, Physiological, Populus.
- metabolism : Populus.
- physiology : Adaptation, Physiological, Water.
- Amino Acid Sequence, Base Sequence, Blotting, Northern, Cloning, Molecular, Electrophoresis, Gel, Two-Dimensional, Molecular Sequence Data, Peptide Mapping, Sequence Alignment, Sequence Analysis, DNA.
Abstract
sp1 cDNA was isolated from aspen (Populus tremula) plants by immunoscreening an expression library using polyclonal antibodies against BspA protein. BspA, which is a boiling-stable protein, accumulates in aspen plants in response to water stress and abscisic acid application (Pelah et al., 1995). The sp1 cDNA was found to encode a 12.4-kD generally hydrophilic protein with a hydrophobic C terminus, which is different from the BspA protein and was termed SP1 (stable protein 1). Northern-blot analysis revealed that sp1 encodes a small mRNA (about 0.6 kb) that is expressed in aspen plants under non-stress conditions and is accumulated after salt, cold, heat, and desiccation stress, and during the recovery from stress. The SP1 detected in plants remained soluble upon boiling, migrated both as a 12.4-kD band and a much higher mass of 116 kD on a 17% (w/v) Tricine-sodium dodecyl sulfate-polyacrylamide gel. Comparative protease digestion patterns, amino acid analyses, and the N-terminal sequences of the 12.4- and 116-kD proteins revealed that SP1 is homo-oligomeric. Furthermore, gel filtration chromatography analysis indicated that SP1 exists in aspen plants as a complex, composed of 12 subunits of 12.4 kD. A large number of sequences deduced from expressed sequence tags and genomic sequences of other organisms with unknown function show high homology to SP1. Thus, SP1 may represent a new protein family. Here, we present the first report on this putative protein family: the cloning, isolation, and characterization of SP1, a stress-responsive, boiling-soluble, oligomeric protein.
DOI: 10.1104/pp.002436
PubMed: 12376651
PubMed Central: PMC166613
Affiliations:
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Sequence</term><term>Base Sequence</term><term>Blotting, Northern</term><term>Cloning, Molecular</term><term>Electrophoresis, Gel, Two-Dimensional</term><term>Molecular Sequence Data</term><term>Peptide Mapping</term><term>Sequence Alignment</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Alignement de séquences</term><term>Analyse de séquence d'ADN</term><term>Cartographie peptidique</term><term>Clonage moléculaire</term><term>Données de séquences moléculaires</term><term>Séquence d'acides aminés</term><term>Séquence nucléotidique</term><term>Technique de Northern</term><term>Électrophorèse bidimensionnelle sur gel</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">sp1 cDNA was isolated from aspen (Populus tremula) plants by immunoscreening an expression library using polyclonal antibodies against BspA protein. BspA, which is a boiling-stable protein, accumulates in aspen plants in response to water stress and abscisic acid application (Pelah et al., 1995). The sp1 cDNA was found to encode a 12.4-kD generally hydrophilic protein with a hydrophobic C terminus, which is different from the BspA protein and was termed SP1 (stable protein 1). Northern-blot analysis revealed that sp1 encodes a small mRNA (about 0.6 kb) that is expressed in aspen plants under non-stress conditions and is accumulated after salt, cold, heat, and desiccation stress, and during the recovery from stress. The SP1 detected in plants remained soluble upon boiling, migrated both as a 12.4-kD band and a much higher mass of 116 kD on a 17% (w/v) Tricine-sodium dodecyl sulfate-polyacrylamide gel. Comparative protease digestion patterns, amino acid analyses, and the N-terminal sequences of the 12.4- and 116-kD proteins revealed that SP1 is homo-oligomeric. Furthermore, gel filtration chromatography analysis indicated that SP1 exists in aspen plants as a complex, composed of 12 subunits of 12.4 kD. A large number of sequences deduced from expressed sequence tags and genomic sequences of other organisms with unknown function show high homology to SP1. Thus, SP1 may represent a new protein family. Here, we present the first report on this putative protein family: the cloning, isolation, and characterization of SP1, a stress-responsive, boiling-soluble, oligomeric protein.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">12376651</PMID><DateCompleted><Year>2003</Year><Month>02</Month><Day>06</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0032-0889</ISSN><JournalIssue CitedMedium="Print"><Volume>130</Volume><Issue>2</Issue><PubDate><Year>2002</Year><Month>Oct</Month></PubDate></JournalIssue><Title>Plant physiology</Title><ISOAbbreviation>Plant Physiol</ISOAbbreviation></Journal><ArticleTitle>Characterization of SP1, a stress-responsive, boiling-soluble, homo-oligomeric protein from aspen.</ArticleTitle><Pagination><MedlinePgn>865-75</MedlinePgn></Pagination><Abstract><AbstractText>sp1 cDNA was isolated from aspen (Populus tremula) plants by immunoscreening an expression library using polyclonal antibodies against BspA protein. BspA, which is a boiling-stable protein, accumulates in aspen plants in response to water stress and abscisic acid application (Pelah et al., 1995). The sp1 cDNA was found to encode a 12.4-kD generally hydrophilic protein with a hydrophobic C terminus, which is different from the BspA protein and was termed SP1 (stable protein 1). Northern-blot analysis revealed that sp1 encodes a small mRNA (about 0.6 kb) that is expressed in aspen plants under non-stress conditions and is accumulated after salt, cold, heat, and desiccation stress, and during the recovery from stress. The SP1 detected in plants remained soluble upon boiling, migrated both as a 12.4-kD band and a much higher mass of 116 kD on a 17% (w/v) Tricine-sodium dodecyl sulfate-polyacrylamide gel. Comparative protease digestion patterns, amino acid analyses, and the N-terminal sequences of the 12.4- and 116-kD proteins revealed that SP1 is homo-oligomeric. Furthermore, gel filtration chromatography analysis indicated that SP1 exists in aspen plants as a complex, composed of 12 subunits of 12.4 kD. A large number of sequences deduced from expressed sequence tags and genomic sequences of other organisms with unknown function show high homology to SP1. Thus, SP1 may represent a new protein family. Here, we present the first report on this putative protein family: the cloning, isolation, and characterization of SP1, a stress-responsive, boiling-soluble, oligomeric protein.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Wang-Xia</ForeName><Initials>WX</Initials><AffiliationInfo><Affiliation>The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture Faculty of Agricultural, Food and Environmental Quality Sciences, The Hebrew University of Jerusalem, P.O. Box 12, Rehovot 76100, Israel.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pelah</LastName><ForeName>Dan</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Alergand</LastName><ForeName>Tal</ForeName><Initials>T</Initials></Author><Author ValidYN="Y"><LastName>Shoseyov</LastName><ForeName>Oded</ForeName><Initials>O</Initials></Author><Author ValidYN="Y"><LastName>Altman</LastName><ForeName>Arie</ForeName><Initials>A</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>AJ276517</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Physiol</MedlineTA><NlmUniqueID>0401224</NlmUniqueID><ISSNLinking>0032-0889</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018076">DNA, Complementary</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>059QF0KO0R</RegistryNumber><NameOfSubstance UI="D014867">Water</NameOfSubstance></Chemical><Chemical><RegistryNumber>3OWL53L36A</RegistryNumber><NameOfSubstance UI="D008353">Mannitol</NameOfSubstance></Chemical><Chemical><RegistryNumber>451W47IQ8X</RegistryNumber><NameOfSubstance UI="D012965">Sodium Chloride</NameOfSubstance></Chemical><Chemical><RegistryNumber>72S9A8J5GW</RegistryNumber><NameOfSubstance UI="D000040">Abscisic Acid</NameOfSubstance></Chemical><Chemical><RegistryNumber>98600C0908</RegistryNumber><NameOfSubstance UI="D003513">Cycloheximide</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000040" MajorTopicYN="N">Abscisic Acid</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000222" MajorTopicYN="N">Adaptation, Physiological</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015152" MajorTopicYN="N">Blotting, Northern</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003001" MajorTopicYN="N">Cloning, Molecular</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003513" MajorTopicYN="N">Cycloheximide</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018076" MajorTopicYN="N">DNA, Complementary</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015180" MajorTopicYN="N">Electrophoresis, Gel, Two-Dimensional</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008353" MajorTopicYN="N">Mannitol</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010449" MajorTopicYN="N">Peptide Mapping</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D016415" MajorTopicYN="N">Sequence Alignment</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012965" MajorTopicYN="N">Sodium Chloride</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014867" MajorTopicYN="N">Water</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2002</Year><Month>10</Month><Day>12</Day><Hour>4</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2003</Year><Month>2</Month><Day>7</Day><Hour>4</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2002</Year><Month>10</Month><Day>12</Day><Hour>4</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">12376651</ArticleId><ArticleId IdType="doi">10.1104/pp.002436</ArticleId><ArticleId 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IdType="pubmed">15012294</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Israël</li></country></list><tree><noCountry><name sortKey="Alergand, Tal" sort="Alergand, Tal" uniqKey="Alergand T" first="Tal" last="Alergand">Tal Alergand</name><name sortKey="Altman, Arie" sort="Altman, Arie" uniqKey="Altman A" first="Arie" last="Altman">Arie Altman</name><name sortKey="Pelah, Dan" sort="Pelah, Dan" uniqKey="Pelah D" first="Dan" last="Pelah">Dan Pelah</name><name sortKey="Shoseyov, Oded" sort="Shoseyov, Oded" uniqKey="Shoseyov O" first="Oded" last="Shoseyov">Oded Shoseyov</name></noCountry><country name="Israël"><noRegion><name sortKey="Wang, Wang Xia" sort="Wang, Wang Xia" uniqKey="Wang W" first="Wang-Xia" last="Wang">Wang-Xia Wang</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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